Webinar Recording: Explore Hidden Cell Populations with cytoclustR

TregsviSNEShahramOur recent Webinar with Dr. Shahram Kordasti and Bioinformatician Thanos Mourikis explored cytoclustR, a new tool they developed with the Cytobank API.

Dr. Kordasti began by reviewing how he set up his experiment pipeline to best identify Treg populations, as outlined in his article featured on the cover of Blood Journal.

Thanos followed with a step-by-step tutorial on how to use cytoclustR with SpadeTreeShahramSPADE in Cytobank to distinguish and report on hidden cell populations that might otherwise go unnoticed with manual gating strategies.

cyobankarrow40x40Check out the recording on our YouTube channel

June 28, 2018  |  API, Education, SPADE, viSNE, Webinars

July Webinar:
Explore Hidden Cell Populations with cytoClustR and the Cytobank API

Best Practices for Adopting Clustering Pipelines in Place ofSPADE Tree Kordasti Manual Gating

Join us Wednesday, July 18 at 9:00 AM PDT for our next free webinar. Learn how Physician Scientist, Dr. Shahram Kordasti of King’s College London and Bioinformatician Thanos Mourikis of Cancer Research UK (CRUK) collaborated to build cytoClustR, a tool you can use with Cytobank’s machine learning algorithms to identify cell subsets in order to help make discoveries in the clinic.

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May 25, 2018  |  Education, Events, viSNE, Webinars

Webinar Recap: Advanced viSNE (t-SNE) Review

Untitled-1Nearly 500 scientists registered for our latest data analysis webinar. Cytobank Application Scientist Geoff Kraker took us on a tour of recently added features like setting the seed (for replicating results), configuring display gate labels, and more. If you missed it, not to worry. The recording is now available online.

cyobankarrow40x40View our latest webinars on the Cytobank YouTube channel

Following the demo, Geoff fielded many great live questions from the viewers. Here are some of our favorites: More »

April 30, 2018  |  Education, Events, viSNE, Webinars

May Webinar: New Developments in viSNE Presented by Geoff Kraker

If you missed the webinar, click here to view the recording on our YouTube Channel.

Join us for our free Webinar May 17, 2018 9:00 AM PDT/ 16:00 GMT

In our previous and popular webinars featuring viSNE, hundreds have logged on to watch as scientists showed us how they used viSNE to make discoveries in the clinic and build comprehensive data analysis pipelines for their high parameter data.

With recent improvements released on Cytobank, it’s a great time to gather and review viSNE best practices, to dive deeper into how you can now explore your data more efficiently with viSNE, and how you can extend viSNE’s capabilities by integrating with other analysis approaches, including basic analysis and more advanced machine learning algorithms.visne_display_gates More »