September 18, 2017  |  Announcements, API, Education, Flow Cytometry, viSNE

Don’t Miss Our Next Webinar:
Create & Optimize Your Data Analysis Pipeline

Join us Wednesday, September 27th for our next free webinar. In this field report, you’ll get a walkthrough of how a successful Mass Cytometry core facility applied Cytobank and data analysis best-practices to streamline and grow their operations.

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Cytobank’s machine-learning algorithms enable faster, more comprehensive analysis of complex life science datasets for single cell and bulk data resolution. Making the leap from manual analysis to Machine Learning-assisted analysis may seem daunting, but it doesn’t have to be.

We’ll learn from guest presenter Dr. Vinko Tosevski, head of the Mass Cytometry Core Facility at The University of Zurich how he leveraged Cytobank in his operation to build an efficient data analysis pipeline.

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May 10, 2017  |  API, Cytobank, User Stories

Two Disciplines, One Analysis Pipeline:
Leveraging the Cytobank API to Find Biological Insights

This week we interview scientists from two different disciplines to hear how they worked together and used the Cytobank API to develop an automated pipeline to find biomarkers for several chronic Graft-versus-host disease (GVHD) outcomes.  We asked bioinformatician and Cytobank consultant Ashu Sethi to share with us her experience using the API, and Cytobank’s own Hannah Polikowsky, on behalf of Vanderbilt, how this pipeline improved her analysis workflow.

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January 11, 2017  |  Announcements, API, Cytobank

New API Enhancements: 4 Sample Workflows for Advanced Analysis

Cytobank has released version 5.5.0 with enhancements to our API, enabling more flexible and functional workflows that leverage Cytobank’s secure infrastructure and cloud-based compute and storage. Among the enhancements are new API endpoints for viSNE, CITRUS, SPADE, sharing, Sample Tags, and compensation.

At Cytobank, we’ve seen emerging needs among scientists and research organizations the world over that are driving the development of our API. These needs often demand functionality beyond that given by basic browser-based analysis sessions, with themes including connecting the Cytobank platform directly to other information systems, allowing batch processing and chaining of native functionality, and supporting pull and push of data, configurations, statistics, and attachments from Cytobank to support external pipelines, algorithms, and studies.

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Visual overview of the high level themes driving development of the Cytobank API.

In this article, we present a variety of workflows highlighting how the Cytobank API can increase the efficiency and velocity of research efforts. Illustrated workflows include:

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August 31, 2016  |  Announcements, API, Cytobank, Release Notes

Streamline and Automate Analysis with Our New API

CytobankAPIAchieve better results, faster. Automate your end-to-end pipelines with the Cytobank Platform via The Cytobank APIThe Cytobank API extends the power of the Cytobank Cloud to any software application. Now bench scientists can more seamlessly interact with computational biologists and reviewers to assess results of internal algorithms and pipelines. 

Now available in the Enterprise versionour RESTful API endpoints offer powerful advantages More »